Kit,
Sorry for missing this post. You made it in the forum for another one of our extensions for a minor add-on to Community Builder, not the JFBConnect forums, so it got a little lost.
As to your question, in the Profiles area of JFBConnect, there is a "Skip CB Activation" setting. If that's enabled, you should disable it. If that's already disabled, just let us know and we can likely help you figure out other reasons that the users are being automatically activated.
Sorry again for the delay, and we'll help however we can (and much speedier)!
Thanks,
Alex